rs52307217 SNP Detail

Summary

• ID
  rs52307217
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92419940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGGAAGGGAG AAAAACTTAG GCTTTTCCTG GAAGCTTGCA
  TGAAAGGCAG TACAGAGAAA GTCACACACA CACACACACA CACACACACA CACACACACA
  G
  AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
  AGAGAGATTA AACAGGTGTT ATTCTAGAAT AATTTCAGAG T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135481236	ENSMUSSNP3688537	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs52307217					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92419940 () rs orientation: forward

Symbol	Name	Function Class
Rr69137	regulatory region 69137	1340 bp distal
Rr69138	regulatory region 69138	within coordinates
Rr76692	regulatory region 76692	1457 bp distal
Rr76693	regulatory region 76693	38 bp distal
Rr76694	regulatory region 76694	836 bp proximal