rs52310746 SNP Detail

Summary

• ID
  rs52310746
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:12501056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGAGTCACA CACACACACA CAAGTAAAAG AGAGACTGTG
  GGAAAAAGTG GGAAGGGAAT GTTAATGTGA CCCAAATAGA ATAAATATAA ATATATATAT
  R
  TGTGTGTGTG TGTATGAAAA TATCATAAAG CCCACTGTGA ATAATTAATA AAAACTTTTA
  AAAGATAAAA AAATAAATTC CATCAGCAAG TTAAAACTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145184188	ENSMUSSNP1562414	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52310746					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:12501056 () rs orientation: forward

Symbol	Name	Function Class
Gm49962	predicted gene, 49962	1635 bp downstream
Map3k4	mitogen-activated protein kinase kinase kinase 4	within coordinates
Rr392297	regulatory region 392297	919 bp upstream