rs52312374 SNP Detail

Summary

• ID
  rs52312374
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:9229279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGATGCTGT GCCTGCTGCC
  TCCTTGTGAC TAGAAAATTC TTCTTAAAGT AGATGAGAGA TCTTCCCATC CATTCTTTAT
  GTCTGTAATA TTTGTTCTAT CAGCATTCCT TTCTATTACA GCTTGCCAGT GGGGTCTCTC
  TCCTCTCTCT TGTTCTCTGT CTCTCTCTCT CTGTGTTTGT GTATATGTGT GTGTGTGTGT
  R
  TGTGTGTGTG TGTGTGTCTG TATGTGTGTG TGTCTGTGTA TAAACAGGAA GTGGTGTCAA
  TTCTCCAAAA AATCTATAAA TTTTTAAAAT TACACTTGTT TATATGTGTG TCTCTGTGTG
  TGTGTCTGTG TGTGTATGCA ATCAAGTGCG CTACAGCATA CATGGGAATG ATTCATGTGA
  GTCAGTTCTC TCCTTCAACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145126195	ENSMUSSNP3812754	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52312374					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:9229279 () rs orientation: forward

Symbol	Name	Function Class
D17Mit225	DNA Segment, Chr 17, Massachusetts Institute of Technology 225	47 bp proximal
Rr521842	regulatory region 521842	561 bp distal