rs52327423 SNP Detail

Summary

• ID
  rs52327423
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:134432226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCGCATGCC TTTAATCCCA GCACCTGGGA GGCAGAGGCA
  GGCGGATTTC TGAGTTCGAG ATTACCCTGG GCTACACAGA GAACCCTGTC TGGAGGTGGG
  G
  GGGTGGAGAA TATATATATG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGTGTATGTG TGTATCTTG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145506818	ENSMUSSNP1465822	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52327423					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134432226 () rs orientation: forward

Symbol	Name	Function Class
Gm25612	predicted gene, 25612	850 bp upstream
Gm70637	predicted gene, 70637	1280 bp downstream
Rabif	RAB interacting factor	Intron