rs52333892 SNP Detail

Summary

• ID
  rs52333892
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:134023824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATATA TATATATATA TATATATATA
  K
  AGAGAGAGAG AGAGAGAGAG AGAGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss144499133	ENSMUSSNP1416138	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321694573	CHEV_5_134470855	CHEVERUD	SCREENING_POP	f	SNP		T	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs52333892					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:134023824 () rs orientation: forward

Symbol	Name	Function Class
D5Mit141	DNA segment, Chr 5, Massachusetts Institute of Technology 141	1328 bp proximal