rs52337155 SNP Detail

Summary

• ID
  rs52337155
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:74997242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTACCTAGG TACTAAATAT
  CTATGAAAAG TAGTTCAGCA ATTATTCAGC ACTGCCTCTT TTTTTAAGAA TAAAGAGTTT
  CAATTTTATT TTTTCTGCTT TTAAAAATTA ATTAAAGTAT AATTATATCA CTTCCCTCTT
  CCTTTTTCTT CTTTCAACAT CTCCCATGTG CCCCTCTCAC TGCCTCTCAC ATTGATGGAC
  Y
  CTTTTGACTA TTATTGTTTT ACACACACAC ACACACACAC ACACACACAC ACACGCACGC
  ACGCACGCAC ACACACAAAG TTGCTGAGTC TATCTAGTGT TGTTTGTGTG TATATGATTT
  CTGGGCTGAA CATTCAGTAC AGAGTGGTTT CCTTCTGTTT TTAACAATGA CCTAGAAGAA
  CAGAGATTTC ACTTTAAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss136639768	ENSMUSSNP1035694	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs52337155					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:74997242 () rs orientation: forward

Symbol	Name	Function Class
Myo5a	myosin VA	within coordinates
Rr197390	regulatory region 197390	1242 bp distal
Rr201722	regulatory region 201722	159 bp proximal
Rr210694	regulatory region 210694	1642 bp distal