rs52349924 SNP Detail

Summary

• ID
  rs52349924
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121709519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAACGCACT ATAGTCCAGG ATAGCCTCAA ACTTGTTTAT
  GGTCTTTTGA CTTCTGCCTT CCAAATGCAG GCAGGGATGA CAGATAGGAA TTGCCACACC
  R
  AGTTCACTTC ACGGGTTCTG AATCATAAGG ATAGATTTTT GTTTGTTTGT TTGTTGTTTG
  TTTGTTTGTT TTGGTTTTTG AGACAGGGTT TCTCTGTGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135731740	ENSMUSSNP2676265	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320906981	CHEV_3_121618788	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52349924					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121709519 () rs orientation: forward

Symbol	Name	Function Class
Gm34119	predicted gene, 34119	within coordinates
Rr584204	regulatory region 584204	307 bp distal
Rr584205	regulatory region 584205	963 bp proximal