rs52352856 SNP Detail

Summary

• ID
  rs52352856
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34079147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAT GTCACAGCAC ACACATGCCT
  R
  TTGCAGTCAT ACACACAATG TACAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139269650	ENSMUSSNP4289729	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52352856					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34079147 () rs orientation: forward

Symbol	Name	Function Class
D14Mit45	DNA segment, Chr 14, Massachusetts Institute of Technology 45	56 bp proximal
Fam25a	family with sequence similarity 25, member A	1757 bp upstream
Tssr128061	transcription start site region 128061	1789 bp upstream
Tssr128062	transcription start site region 128062	1065 bp downstream
Tssr128063	transcription start site region 128063	1856 bp downstream