rs52358134 SNP Detail

Summary

• ID
  rs52358134
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63692296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGCCTGCC TGGATGCCTG TTTCCATCCC CACCCCAGTA
  CACACACTCA AGAGCACACA CACACACAGA CACACACACA CACACAGACA CACACACACA
  C
  TCACACACAC ACACACACAC ACACACACAC ATCTCAGAGG GGAGACAATG TAGAAGGTGC
  CTGTCTTTGT GTTTCCAGGT TCTTTCAGAT GTTCCCCTT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss136557754	ENSMUSSNP4181524	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs52358134					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63692296 () rs orientation: forward

Symbol	Name	Function Class
D9Mit31	DNA segment, Chr 9, Massachusetts Institute of Technology 31	575 bp distal
D9Mit245	DNA segment, Chr 9, Massachusetts Institute of Technology 245	within coordinates
Gm68073	predicted gene, 68073	within coordinates
Rr2253	regulatory region 2253	1037 bp distal
Rr2254	regulatory region 2254	within coordinates