rs52358966 SNP Detail

Summary

• ID
  rs52358966
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37739740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAGC TTCAATGGGA GAACCTGTCT
  C
  TCTGTCTGTC TGTCTGTCTA TCTGT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss134811038	ENSMUSSNP2181103	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320711750	CHEV_3_37584513	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs52358966					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37739740 () rs orientation: forward

Symbol	Name	Function Class
Gm65174	predicted gene, 65174	1441 bp downstream
Rr575540	regulatory region 575540	1188 bp proximal
Rr575541	regulatory region 575541	1559 bp proximal
Rr575542	regulatory region 575542	1661 bp proximal