rs52359943 SNP Detail

Summary

• ID
  rs52359943
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:112798062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATGTTGAGCC CAGGTTAAAA AAAGAAAGAA GGAAAGAAAG
  AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA AGGAAGGAAG
  R
  AAGGAAGGAA GAAAGGAAGA AAGAAAGGAA GAAACCCAAA GAGACCACCA GGAACCACAA
  CTCTGATGCA AGCCCATGAG AGTCTTTATT CAAGCCCGAG A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss149087927	ENSMUSSNP6359577	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52359943					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:112798062 () rs orientation: forward

Symbol	Name	Function Class
Gm30529	predicted gene, 30529	within coordinates
Gm42865	predicted gene 42865	within coordinates