rs52361973 SNP Detail

Summary

• ID
  rs52361973
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:141400228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGCCATAGCA ATTTATCTAC ATATCATCCG TGACTTTTTT
  TCATGCTGCA GTAGCATATT TGAGTAGTTT AGTGTTTTTG TTTTGTTTTG TTTGTTTGTT
  W
  AAAAAAGGTT TTAAAAAAGG TTTTAAAAAC TAAAAGTAAT TACCATGTGC CCTTCTATGA
  AAAATGTTTG TCAAGCTCTG GCTACCTCAA AAATATTCAA C                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134479529	ENSMUSSNP921367	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52361973					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:141400228 () rs orientation: forward

Symbol	Name	Function Class
Rr5507	regulatory region 5507	1172 bp proximal
Rr9283	regulatory region 9283	247 bp distal