rs52365282 SNP Detail

Summary

• ID
  rs52365282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:121746436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGTTTGT TGTTGTTACT
  GTTGTTGTTG CTGTTGTTGT TTTGGGACAG GTTTCCTGTG TATCCCTGGC TGTCCTGGAA
  CTCACTTTGT AGACCAGGCT GGCCTCGAAC TCAGAAATCC GCCTGCCTCT GCCTCCCGAG
  TCCTGGAATT ATTTTATTTT ATTTTATTTC ATTTTATTGG TTTTTCGAGA CAGGGTTTCT
  Y
  TGTATAGCCC TGGCTGTCCT GGAACTCACT CTGTAGACCA GGCTGGCCTT GAACTCAGAA
  ATCCTTTTGC CTCTGCCTCC TAAGTGCTGG GATCAAAGGC CTGCACCACT GCCCGGCACC
  ACCCTGGAAT TCTTTTTTTT TTTTTTTAAA TATTTATTTA TTTAATGTAA GTACACTGTA
  GCTGTCTTCA GATACTCCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	MSM/Ms
ss145833527	ENSMUSSNP6530615	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	MSM/Ms
rs52365282					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:121746436 () rs orientation: forward

Symbol	Name	Function Class
Dctn5	dynactin 5	within coordinates
Gm15489	predicted gene 15489	1075 bp downstream
Rr153390	regulatory region 153390	165 bp proximal
Tssr68863	transcription start site region 68863	1074 bp upstream