rs52382089 SNP Detail

Summary

• ID
  rs52382089
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156033747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAC CTGTGTTGTG TGATTGCTGG
  R
  CCAGCGCCTG CATAGAGAAG CCAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148068184	ENSMUSSNP909165	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320578126	CHEV_2_156017563	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52382089					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156033747 () rs orientation: forward

Symbol	Name	Function Class
Rr568205	regulatory region 568205	806 bp distal
Rr568206	regulatory region 568206	308 bp distal
Rr568207	regulatory region 568207	95 bp distal