rs52387301 SNP Detail

Summary

• ID
  rs52387301
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97553629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCCAATTCG AAGAAATGGT ATGGTAACCC ATGCTTTTCT
  CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTGTCT GTCTCTCTCT
  S
  TCTCTCTCTC TCTCTCTCTC TCCTTTTTTT AACAGTAAAA AGTGTAGCAC AATATCATGG
  CCAAGATAAG AACACAGTCA AAGATGTGCC CTTCCTCTC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324496789	CHEV_13_98187076	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52387301					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97553629 () rs orientation: forward

Symbol	Name	Function Class
Rr274314	regulatory region 274314	829 bp distal
Rr277788	regulatory region 277788	172 bp proximal
Rr285518	regulatory region 285518	830 bp distal
Rr286473	regulatory region 286473	1932 bp proximal