rs52401106 SNP Detail

Summary

• ID
  rs52401106
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:110283532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGAGCCA AACACTAGGT
  GGAGTCTTAT GGAAGAGTAG GGAGAAAAAC TGAGAGATCT GAAGAGGACA GAGATTCCTC
  AGGAAGACCA ACAGACTCAA CTAATGGGGA CCCTTGGGGC TCTCAGATAT TGAACCACCA
  AACAAAGAAG GGAGAAGCAT GGACTGGACC TAGGCCTCTA TTGTATGCAT ACAGTGTTAC
  T
  CATCTCTTTC TCTCTCCCTC TCTCCCTTTT ACCCTTTCTC TCTCTCTTCA GTGAATTCTT
  TTCAGTTTCC CTCCAGAATT CTTCTTTGGT CCATAAATTG TTTATCTTTA AATTAAAAGT
  AGTTTTTAAC TGGCATATAA AATTGTATTT TTGAGCTATC ATTTATTGCT TCAATCGTTT
  ATGTATTATG TAATGTTTAA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss134265798	ENSMUSSNP69104	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs52401106					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:110283532 () rs orientation: forward

Symbol	Name	Function Class
Rr2611	regulatory region 2611	269 bp proximal