rs52401309 SNP Detail

Summary

• ID
  rs52401309
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165318634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCC TCTTTTTAAA AAACAAAAAA
  M
  AAAAAAAAAA AAAAAAACCC AAAAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss146001268	ENSMUSSNP2584779	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52401309					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165318634 () rs orientation: forward

Symbol	Name	Function Class
Adcy10	adenylate cyclase 10	within coordinates
Gm6050	predicted gene 6050	1711 bp downstream
Gm70586	predicted gene, 70586	1903 bp downstream