rs52402252 SNP Detail

Summary

• ID
  rs52402252
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:169724689 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GCAAGATGTT CAGTGGATAA AGTCACTTGC AGAATGCACA
  GTAGAAATAG AAAAGCAGAC CCTGAGAATT ATTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  T
  CTCACACACA CACACACACA CACACAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGTAA ACTTTAAGTT GAGAGAAGTA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss146113782	ENSMUSSNP1121254	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52402252					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:169724689 () rs orientation: forward

Symbol	Name	Function Class
Gm70803	predicted gene, 70803	1419 bp downstream
Gm70807	predicted gene, 70807	within coordinates