rs52403505 SNP Detail

Summary

• ID
  rs52403505
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:89039585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTGGGTGA TGTCATTATG
  CCTGTGGTTT TTGCTGCCAA TCATCCAGGT ATATAAAAGG CCTGTGGCAG ATGTTGAAAC
  ACACACTCCA GAAACCTACT GCTTAATCTT CCTCTGAACA CTCCACTCCT GACAACATGT
  GCTACTACGG AGGATATTAT GGAGGCCTGG GCTATGGCTA TGGAGGCCTA GGCTATGGCT
  R
  TGGCTGTGGC TATGGTGGAT ATGGTTATGG CTGCTGCCGC CCACTGTGCT GTGGAAGATA
  CTGGTCTTAT GGCTTCTACT GAGGACCTTA TGTAGAGACC CAGCCTTTCT AACCAGAAGT
  GTTTCCAAGT GTTTTCACAC CTGAAACTCA AACATGTCTT CAAAAATTTC AACTATAAAA
  TAAAATATTT AAAATATTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148513989	ENSMUSSNP2290559	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52403505					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:89039585 () rs orientation: forward

Symbol	Name	Function Class
Gm35004	predicted gene, 35004	within coordinates