rs52405651 SNP Detail

Summary

• ID
  rs52405651
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40547759 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATGGTGGC TCACATGACC
  ATTGTGACTC TAGTTCCTTG GGATTCAAAG CCCTCTTCTG GACCCCCTAG GCACTGGGAA
  CACATATGGA GCATAGGCAT GCACACAGGC AAATACTCAT ATACATAAAA TATAAATTAA
  CCACCCATAT AAACCATCAG TGACTCCCTG TGCCGATAGT AGATCCAAAC TCCTCAGCCG
  M
  CTGTTTTTCA AACCAACTGT GATTGTCCCA TTTCTTTTTT TTGGTTTTTC GAGACAGGGT
  TTCTCTGTGT AGCCCTGGCT GTCCTGGAAC TCACTCTGTA GACCAGGCTG GCCTCGAACT
  CAGAAATCTA CCTGCCTCTG CCTCCCAAGT GCTGGGATTA AAGGCGTGCA CCACCACCGC
  CCGGCGATTG TCCCATTTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147068182	ENSMUSSNP3430812	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52405651					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40547759 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	within coordinates
Tssr93028	transcription start site region 93028	1306 bp upstream