rs52414448 SNP Detail

Summary

• ID
  rs52414448
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:78171082 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTAAAATG ATTCTGCAAG
  TCTCACCTCC CAACTCCAAG GGCAACTTGT TGCCATAGTG ATGCAGGTGG CACCAAGCCC
  GGATTTGCTT ACACAAACTG TAATAAGCGC GGAAAGTATA TATATATAAA AAAAAACCCA
  CAGGTAATTT ATTACAAATT TTGATCCAGC AATCCACTAC CAGTTGGTTA TTACACAAAA
  R
  AGCTTTGCTG AAACCACCTT TTTTCCATCT CTTTCTCTTA TACGTCTCTT TTCACCGTGG
  TTCTGTTCTT CATCTCTTTC TCTTCCTATC TCCCACCTGA AAAGCTGGAG CTTTGGTCTG
  TGATGGTAGC GGGAAGAAAG CACATCTTAT GCAGTCTATC TGCATATCAA GTGGAACCAT
  GGGAAACACT ACCAGAAACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139789220	ENSMUSSNP2086679	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52414448					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:78171082 () rs orientation: forward

Symbol	Name	Function Class
Epsti1	epithelial stromal interaction 1	within coordinates
Rr300474	regulatory region 300474	283 bp distal
Rr389888	regulatory region 389888	within coordinates