rs52415808 SNP Detail

Summary

• ID
  rs52415808
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:136536342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAC ACACACACAC ACACACACAC
  A
  CACACGCACA CACACACACA CACAC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135937430	ENSMUSSNP1245811	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52415808					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136536342 () rs orientation: forward

Symbol	Name	Function Class
Gm66095	predicted gene, 66095	998 bp downstream
Ppp3ca	protein phosphatase 3, catalytic subunit, alpha isoform	Intron
Rr585880	regulatory region 585880	1766 bp distal
Rr585881	regulatory region 585881	209 bp proximal