rs52417597 SNP Detail

Summary

• ID
  rs52417597
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:23587639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AAGTTTGAAA ATTATACAAA TTAAAGAAAG AAGTATACAC
  AAAAAAAATA AAATACTCTT GCACAATTAA GTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
  C
  TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATGCCACGT
  GTGTTCTAAT GCCTAATTAA AGTCTTCTCT CACCTGCTGA A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148055735	ENSMUSSNP4255278	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs52417597					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:23587639 () rs orientation: forward

Symbol	Name	Function Class
5031425E22Rik	RIKEN cDNA 5031425E22 gene	within coordinates