rs52431526 SNP Detail

Summary

• ID
  rs52431526
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26810339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAGAAGTTC TAATCCCCGA ACCATGTGAG TCTGGCATTG
  TGGTACAAAC CATAAGATAA GCACTTGGGA TGTAGAAGCT ACCCATATAG TGAGTTCAAG
  Y
  GAGTTCAAGT CTAGCCTAGA ATGTCTGAGA TATCTCAAGA GAAGGAAGGA AGGAAGGAAG
  GAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AGGAAGGAAG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C3H/HeJ	DBA/2J	NZW/LacJ	PWD/PhJ
ss61582181	NES17531409	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C3H/HeJ	DBA/2J	NZW/LacJ	PWD/PhJ
rs52431526					SNP	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61582181	NES17531409	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26810339 () rs orientation: forward

Symbol	Name	Function Class
Rr266884	regulatory region 266884	540 bp distal