rs52431528 SNP Detail

Summary

• ID
  rs52431528
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153793614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  TCTCTTTCTC CCCCATCCCT CCCTCCCTCC TTCCCTCCCC TCCTCTTCTT CTCCTCCACA
  M
  TCCTCTATTT CTGACAAGTG GTACTGCCTT TCATTCTTGA GGTTTTAGGA AGTGGGTAGA
  CATGAAGGAG AAATGAAGGG ACTTACTGCA GAGACCAAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148011191	ENSMUSSNP214570	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320566728	CHEV_2_153777430	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs52431528					SNP	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153793614 () rs orientation: forward

Symbol	Name	Function Class
Bpifb4	BPI fold containing family B, member 4	Intron
Rr567759	regulatory region 567759	1170 bp proximal
Rr567760	regulatory region 567760	1378 bp proximal