rs52432283 SNP Detail

Summary

• ID
  rs52432283
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:174888377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGAGTGAG TACATGGAAT
  TTTTTCCTTT ACTCCTTTCT TTTTTTGAAA TCTCATCCAC CAACTTGTTT CTATTAATTG
  CTAGTATTCT ACGGTGATAT GGAAGTTAAC TTTTTTTATG AGAACACAGT TTATTGTAAA
  TTGTTTTATT TCTCTCTTTA TTCCTTAGAT TCTAAAATAA AAGCAAGTGG CCTGATTATT
  Y
  ATTTTTATAT AAATAATTAT TTATATAATT AAAATAATTA TTTAATTTTT TTTCCTTTGG
  AAGGGATGAT TGTTTTGAGA CGATAGTATT TGGGGAATCA TGTGTGTTAC AGCTCTATTC
  TTAACTTGCT CTCTAATGTG GCCAAGTTTG ATCAAGGTGA GAGATTACTC AGAACCCTGG
  TCTCAGCCTG TTGCTGGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss146304491	ENSMUSSNP7142079	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320146775	CHEV_1_176990942	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs52432283					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174888377 () rs orientation: forward

Symbol	Name	Function Class
6330418B08Rik	RIKEN cDNA 6330418B08 gene	1146 bp downstream
Rgs7	regulator of G protein signaling 7	Intron