rs52432601 SNP Detail

Summary

• ID
  rs52432601
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16048834 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCTAACCT CCACATGTGC ACACACAGAT CCCCCCTCTC
  TCTCTCTTTC TCATACACAC ACAGACACAC ACACACACAC ACACACACAC ACACACACAC
  G
  TTAATGGTTA AGAGAACTCT TACAGAGAAC CAGGGTCAGG TTCCCAGCTG ACAACTGCCT
  GTAATTCCAG GTCCAGGGAT CCAATGCCTT CTGGTATTT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148383637	ENSMUSSNP3257206	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs52432601					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16048834 () rs orientation: forward

Symbol	Name	Function Class
Bbc3	BCL2 binding component 3	within coordinates
Cpgi18372	CpG island 18372	1757 bp distal
Cpgi18373	CpG island 18373	397 bp distal
Rr167075	regulatory region 167075	33 bp distal
Rr380460	regulatory region 380460	190 bp upstream
Tssr64601	transcription start site region 64601	1234 bp downstream
Tssr64602	transcription start site region 64602	692 bp upstream
Tssr70736	transcription start site region 70736	922 bp upstream
Tssr70737	transcription start site region 70737	860 bp upstream
Tssr70738	transcription start site region 70738	846 bp upstream