rs52433092 SNP Detail

Summary

• ID
  rs52433092
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:34871371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGAATTCTTA CAGAATATCC CAAAGACCAA GTATAAATTC
  AGTATTTCTG GCCACTTGGG GTTAATGACA TATACATACA TATATATGTG TTTGTATATA
  Y
  ATATACGTAT ACATATACAT ATACATATAC ATATACATAT ACATATGTAT ACTTACATAC
  ATGCATATAT ATGAATGGAC CAGACAGAGT AGGATAAGAT G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss148859849	ENSMUSSNP4646584	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs52433092					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:34871371 () rs orientation: forward

Symbol	Name	Function Class
Gm47150	predicted gene, 47150	211 bp upstream
Rr275718	regulatory region 275718	430 bp proximal
Rr283182	regulatory region 283182	1621 bp distal