rs52435753 SNP Detail

Summary

• ID
  rs52435753
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48032454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTAGCTAC CAAAAAGATA
  CAGCAGTATG CAGCCTGGGA AGTTGATAAG GACTCGGCCT ATCTTAATGC ATGAAAACGT
  GTTCCTGTGG CAATCCAACA TGATAAGGTC AGAACAGAAG TTGCCTTGGC ACAGGAAATG
  TGGCTGTGTT AAAAACCTAA GTATGTACAA TAAAGGTTGC TGGGTAATTT AAAAAAGACA
  T
  CTTGATTTTT TTTTTTGATT TTTTAAAAAT CATTTTATTT TCTCTCTTTT TGTTGATGTT
  GGTTCTTGAA CCCAGGGTCT CATGGATGCT AGCAAGCACC CTATTAGTGA TTGACACTCC
  AGACCCAGCT TGATCTTCAT AAAAACTCAT GTGTGTGTGT GTGATTTTAA ATGAAACAAA
  TGAAACTCAG AATTTATAAT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145708700	ENSMUSSNP3800126	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52435753					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48032454 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr12	DNA Segment, Chr 17, Derry C. Roopenian 12	1059 bp proximal
D17Mit66	DNA segment, Chr 17, Massachusetts Institute of Technology 66	1046 bp proximal
Gm65768	predicted gene, 65768	1736 bp upstream