rs52435909 SNP Detail

Summary

• ID
  rs52435909
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124791594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCATGTGG TTGCTGGGAT
  TTGAACTCAG GACCTTCGGA AGATCAGTCA GTGCTCTTAA CCACTGTGCC ATCTCTCCAG
  CTCCGAAAAA CATTAAAAAA AAAAAAGACA TTTATCATTA ACTTCTTTTA AATTTAAAAG
  ATTTTTATAC ATGTATTCAA TGATTTTTTT TTTGTTGTTT TTGTTTTTTT TTTGTTTTTC
  G
  AGACAGGGTT TCTCTGTATA GCCCTGGCTG TCCTGGAACT CACTTTGTAG ACCAGGCTGG
  CCTCGAACTC AGAGATCCAC CTGCCTCTGC CTCCCGAGTG CTGGGATTAA AGGCGTGCGC
  CACCACGCCC GGCTCCTCGA TGTTATTTTT ATCATCCAGT GCCTGTATAC CCTTCTTTCA
  CCTCTCCTGG ACTTTCCCAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145839142	ENSMUSSNP3982998	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs52435909					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124791594 () rs orientation: forward

Symbol	Name	Function Class
Gm29897	predicted gene, 29897	within coordinates
Rr672611	regulatory region 672611	1707 bp proximal
Tssr80018	transcription start site region 80018	1922 bp upstream
Tssr80019	transcription start site region 80019	1934 bp upstream