rs52446109 SNP Detail

Summary

• ID
  rs52446109
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:47447074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ATATATATAT ATGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGAGT GTGTGTGTGT GTGTGTGTGT ATACACATAT GTATGTATAT
  R
  TATATATATA TATATATATA TATATATACT CTTTTGAAAA ATTAAAACTA TACTAATTTT
  TAAATATCAC TGTATTAGTA ATTGAATTAT GGTAATGATT A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146510199	ENSMUSSNP7058253	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52446109					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:47447074 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl22	DNA segment, Chr 2, University College London 22	within coordinates