rs52447773 SNP Detail

Summary

• ID
  rs52447773
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:89039604 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGTGGTT TTTGCTGCCA
  ATCATCCAGG TATATAAAAG GCCTGTGGCA GATGTTGAAA CACACACTCC AGAAACCTAC
  TGCTTAATCT TCCTCTGAAC ACTCCACTCC TGACAACATG TGCTACTACG GAGGATATTA
  TGGAGGCCTG GGCTATGGCT ATGGAGGCCT AGGCTATGGC TATGGCTGTG GCTATGGTGG
  M
  TATGGTTATG GCTGCTGCCG CCCACTGTGC TGTGGAAGAT ACTGGTCTTA TGGCTTCTAC
  TGAGGACCTT ATGTAGAGAC CCAGCCTTTC TAACCAGAAG TGTTTCCAAG TGTTTTCACA
  CCTGAAACTC AAACATGTCT TCAAAAATTT CAACTATAAA ATAAAATATT TAAAATATTA
  TTGAAATTTA ACACAGTCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148513995	ENSMUSSNP6162716	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52447773					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:89039604 () rs orientation: forward

Symbol	Name	Function Class
Gm35004	predicted gene, 35004	within coordinates