rs52452437 SNP Detail

Summary

• ID
  rs52452437
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:13411197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAGTCAA TATTTATTTT
  TATTGTAAAT TTTATAACTA TCAACATATC TTAAGAATAT TCATGCATTT AATCAATTGT
  AATTTTTATA TAAACTATAT ATTTAAAATT TATTTCTTTT ATTATTTTTA TAAACTTTAT
  TATATAAACT TTTTCAAATA CATATAAATA TTGCATACCA AGTTTAACAA GACCCAAAAT
  R
  TATATGTGCT TATATTCATC AGATAAAGGA AAAAATGATA CTAGATATAA GTCTGTTGTA
  ATATCCCATA TGATCATTAA CATGTAAGTA ATCAAATCCA ATCACCTTTA ATCCCAACAC
  TTGGGAGGCA GAGGCAGGTT GATTTCTGAG TTAGAAGCCA GCCTGGTCTA CTGAGTGAGT
  TCCAGGACAG CCAAGGCTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss63224354	NES17472999	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs52452437					SNP	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63224354	NES17472999	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:13411197 () rs orientation: forward

Symbol	Name	Function Class
Or5b115-ps1	olfactory receptor family 5 subfamily B member 115, pseudogene 1	322 bp downstream