rs52455201 SNP Detail

Summary

• ID
  rs52455201
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:138724742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCT GATTATGAGA AAGGAGAAAA
  K
  AAGAAATGAT CATAGCAGTA CTTTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss145581747	ENSMUSSNP4900111	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G		G
ss320001239	CHEV_1_140693581	CHEVERUD	SCREENING_POP	f	SNP				G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs52455201					SNP	T	G	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:138724742 () rs orientation: forward

Symbol	Name	Function Class
Gm70139	predicted gene, 70139	893 bp downstream