rs52456685 SNP Detail

Summary

• ID
  rs52456685
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:147026682 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCTAGCTG CTCCTGCTCA
  GAATATGGGG GTCAGGCAGC AGATAGAACC TCAGGCAGCT CTGAAACTCA GTGAGGGTGA
  ATGTAGGCTT TCCTTGGGAC TGCCACAGCC CTGGCTGGAG GGCCTCAGCA TCACCCTTGC
  CTCTGCCTCC TGGGCACTCT GACCTCTGAA CACTCTGACC TCTGGACACT CTGACCTCTG
  A
  ACACTCTAAC CTCTGAGCAC TCTGACCTCT GGACACTCTG ACCTCAGGAC ACTCTGACCT
  CTGAGCACTC AGACCTCTGG ACACTCTGAC CTCTGGGCAC TCTGACCTCT GAATCATCTC
  CTTTCTCCAT GTCAGTCGGG TTTACATCTG AGTGCTTTTT CTCATCCTGC TTTTTGTGTC
  ACAGAAGTCT TGAGTCTGTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134009509	ENSMUSSNP4786162	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs52456685					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:147026682 () rs orientation: forward

Symbol	Name	Function Class
Gm68111	predicted gene, 68111	676 bp downstream