rs52463213 SNP Detail

Summary

• ID
  rs52463213
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:163642522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CAATGGCCAC TGGGCATTTG GGTAGTTTCT GTGGCTTAGC
  TGTTGTATAT AGTTTTAAAA AAAACATTTG AAATCAGTGT GTGTGTGTGT GTGTGTCTGT
  S
  TGTCTGTCTG TCTGTCTGTC TCTGTGTGTG TCTCTGTGTG TCTGTCTGTC TGTGTGTCTG
  TCTGTGTGTG TGTGTGTGTG TATGTGTGTG TGTGTGTGTG T                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148212753	ENSMUSSNP1893438	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52463213					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163642522 () rs orientation: forward

Symbol	Name	Function Class
Rr569492	regulatory region 569492	1737 bp distal
Rr569493	regulatory region 569493	268 bp proximal