rs52467473 SNP Detail

Summary

• ID
  rs52467473
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:49780824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGCTAACA CATGTAATAG
  GAGAAAGTGT CTTCGGCAAA AGATTAAGTT ACACGGTTTA TAAAAGCACA TTATTGTGGC
  TCCCGGCAGA ACGATCTAAT TCTTAGCTTT TGTTGGTGTT TCTATTAGGA TTACAAAGGA
  CTTTGGGAAG TGATCTGTAT GACTGAACCA CCACACAGGA GCACACACAC ACACACACAC
  A
  CACACGCACG TGCACGCACG TGCACGCACA CGCACACGCA CACACGCACA CGCACGCACG
  CACGCATGCA CGCACGCACA CACTCACACA CACGCACGTG CACGCACGTG CACGCACACG
  CACACGCACA CACGCACACG CACGCACGCA CGCACGCACG CACACACTCA CACACACACA
  CACACACACA CATACACACA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148409962	ENSMUSSNP5202015	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52467473					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:49780824 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15849	CpG island 15849	within coordinates
Gm71615	predicted gene, 71615	within coordinates