rs52468429 SNP Detail

Summary

• ID
  rs52468429
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31351533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATAG ATAGATAGAT AAATGAGATA
  K
  GTAGATAGGT GGGTAGGTGG GTAGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss145456942	ENSMUSSNP1838790	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss325358800	CHEV_17_31269504	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs52468429					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31351533 () rs orientation: forward

Symbol	Name	Function Class
Rr334776	regulatory region 334776	1733 bp distal
Rr341223	regulatory region 341223	669 bp proximal