rs52485618 SNP Detail

Summary

• ID
  rs52485618
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:55493742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GAATTCTGTA GAGGTTTGTG TTCCCATGCT AATTATGCTA
  CCCAAAAATC CGTTTGCCAT GTCCCACCCG TAGAACTAAA GGAAGCCTGT CCACACTTAG
  K
  TTTGCTTGTT TGTTTTTTTG TTTGTTTGTT TGTTTGTTTG TTTTTCGACA GGGTTTCTCT
  GTGTAGCTCT GGCTGTCCTG GAACTCACTT TGTAGACCAG G                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss145790212	ENSMUSSNP5022325	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs52485618					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:55493742 () rs orientation: forward

Symbol	Name	Function Class
Rr392767	regulatory region 392767	within coordinates