rs52486257 SNP Detail

Summary

• ID
  rs52486257
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52845410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GTTGACCATA GTGAGCAGAG GTCCTAAAAT TCAATTCCCA
  ACAACCACAT GAAGACTCAC AACCATCTGT ACAGCTACAG TGTACTCATA TACATTAAAT
  A
  AATAAATAAA TAAATAAATA AATAAATCAT AAGTCTTTTA AAAAGAAAAT AAAATAAAAA
  ACAAGCAAAC AAAAGACAAG GAAAAAATAA TTATTTAAAT T                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137742226	ENSMUSSNP649867	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52486257					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52845410 () rs orientation: forward

Symbol	Name	Function Class
Akap6	A kinase anchor protein 6	within coordinates
Gm51971	predicted gene, 51971	within coordinates
Gm59837	predicted gene, 59837	863 bp downstream
Rr466053	regulatory region 466053	1840 bp distal
Rr466054	regulatory region 466054	1097 bp proximal