rs52510600 SNP Detail

Summary

• ID
  rs52510600
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85590660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAT GTCCCTGGCC CATTTTGAGA
  G
  AATCCCAGTC TATTAATACC CTCAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148271237	ENSMUSSNP2307254	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss325042851	CHEV_15_85536889	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52510600					SNP	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85590660 () rs orientation: forward

Symbol	Name	Function Class
Lncppara	long noncoding RNA near Ppara	within coordinates
Mirc31	microRNA cluster 31, including Mirlet7c-2 through Mirlet7b	144 bp proximal
Mirlet7b	microRNA let7b	860 bp upstream
Mirlet7c-2	microRNA let7c-2	144 bp upstream
Rr507292	regulatory region 507292	50 bp distal
Rr507293	regulatory region 507293	682 bp proximal