rs52516076 SNP Detail

Summary

• ID
  rs52516076
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100853889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAC ACACACACAC ACACACACAC
  A
  CACACACACA CACACACGTA GATGA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137997074	ENSMUSSNP3052595	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52516076					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100853889 () rs orientation: forward

Symbol	Name	Function Class
Gm36572	predicted gene, 36572	441 bp upstream
Gpr68	G protein-coupled receptor 68	within coordinates
Rr471362	regulatory region 471362	48 bp proximal
Rr471363	regulatory region 471363	269 bp proximal
Tssr114718	transcription start site region 114718	1749 bp downstream
Tssr117330	transcription start site region 117330	206 bp downstream
Tssr117331	transcription start site region 117331	240 bp downstream
Tssr117332	transcription start site region 117332	260 bp downstream
Tssr117333	transcription start site region 117333	295 bp downstream
Tssr117334	transcription start site region 117334	321 bp downstream
Tssr117335	transcription start site region 117335	396 bp downstream
Tssr117336	transcription start site region 117336	443 bp downstream