rs52528796 SNP Detail

Summary

• ID
  rs52528796
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181974879 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTCAGTT GGAATTATAA
  CTTGGTCACA TAAAACTAGA TGCCATTAAA GTTGTTCAAG GGATTTTCGG GGCGGGGGGA
  GGTGCATGCC TTTCTTTGTA GAATCAGGTT TCTGGTGGAT TCCTAGAAGA TTCCAGAAGA
  GAGGAAGACG GTTCTTAATT GTGAAGGAAT TCTTGTTGGT TTTTGTTGTT GTTGTTCTTT
  G
  GGTTTCTTGT TTTGTTTTGT TTTGTTTTGT TTTGTTTTCT TTCCTCGTGA GAGGCTTTAG
  CCAGACTTCT TGATGTCACG GTTAGCTTTA GTTGTCACCT TGACAGCGAG TTCCCAGCAA
  GCAGAGAAGA ACCACAGCTG AAGAACTGCC GTGATCTGAT TGGCTCTGTG AGGTGTGTTC
  TTAATTGCTA TTTGATGTAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss146403304	ENSMUSSNP4498805	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52528796					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181974879 () rs orientation: forward

Symbol	Name	Function Class
Rr424879	regulatory region 424879	1380 bp distal
Rr424880	regulatory region 424880	1635 bp distal
Rr424881	regulatory region 424881	1623 bp proximal