rs52528841 SNP Detail

Summary

• ID
  rs52528841
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:104893639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TGGAAAGAGA GGCCCATTGG TCTTGCAAAC TTTATATGCC
  TCAGTACAGG GGAACAGGGA ACGCCAGGGC CAAGAAGTGG GAGTGGGTGG GAAGGGGAGT
  G
  GGGGGGAGGG TATGGGGGAC TTTTGGGATA GCATTGGAAA TGTAAATGAA GAAAATACCT
  AATTAAAATA AAATAAAGTT CTTCTCACTT AGCCAGCAAG A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss136905019	ENSMUSSNP4820016	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs52528841					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:104893639 () rs orientation: forward

Symbol	Name	Function Class
Cpne4	copine IV	within coordinates
Tssr86830	transcription start site region 86830	1928 bp upstream
Tssr86831	transcription start site region 86831	1960 bp upstream