rs52536930 SNP Detail

Summary

• ID
  rs52536930
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:97205350 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CAGAAAAACG TGGGACAGTG ACTGAGGACA TCCAGACCCC
  AACCTTTGTC CTCTGCATGT GGATGAGCCC TCTCATGTAC ACACACGCAC ACACACACAC
  R
  CACGCACGCA CGCACGCACG CACGCACACA CGCACACACG CACCACAAGA AACTGTCTAC
  TGATGTCCCG TAAACCAAAC CTTTTTTATT TAAATTAAGG A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148886329	ENSMUSSNP1413252	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52536930					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:97205350 () rs orientation: forward

Symbol	Name	Function Class
Bmp2k	BMP2 inducible kinase	Intron
Rr399178	regulatory region 399178	1470 bp downstream
Rr615014	regulatory region 615014	1499 bp distal
Rr615015	regulatory region 615015	1615 bp distal