rs52555608 SNP Detail

Summary

• ID
  rs52555608
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:88171407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CCTCTGGGGT TCTCAATACC ATTCGGGCTG GTATATATAT
  AAACAATGTA TTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTAT GTGTGTGTGT
  S
  TATACATACA CATACATATA TATTACATAT ATTACACACA TACAATATAG ATATATATCT
  ATACCTAGCT ATATGTTTTA TATACATATC TATATTATGT A                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss139916061	ENSMUSSNP6978130	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52555608					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:88171407 () rs orientation: forward

Symbol	Name	Function Class
Rr389976	regulatory region 389976	244 bp downstream