rs52564737 SNP Detail

Summary

• ID
  rs52564737
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:77727444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAGGGGAC TTTTGGGCTA
  GCATTTTAAA TGTAAATGAA GAAAATATCT AATAAAGATT GAAAAAGAAA AAAAATGTCT
  AAGGGTGAGG GCATTCTCAT GCTTCAGTTA CACAAATCAG AATGTGCTCT ACTTTTTTTT
  TTTTTTTTTT TTTTTTTTTT TTTTTTGGTT TTTCAAGACA GGGTTTCTCT GTGTAGCCCT
  G
  GATGTCCTGG AACTCACTTT GTAGACCAGG CTGGCCTCGA ACTCAGAAAT CTGCCTCTCT
  CTGCCTCCCG AGTGCTGGGG TTAAAGGCAT GTGCCATCAG GCCCGGCTAT ATACATATTA
  CCAAATATTT ATATTCAAAT GTTCTCAAAT TTTTCCAGTT CATAAAGTAA ACCTGGAAGT
  TTTCTATCTG GATGCCATAT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss145115673	ENSMUSSNP1237558	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52564737					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:77727444 () rs orientation: forward

Symbol	Name	Function Class
Gm53379	predicted gene, 53379	within coordinates
Tssr67298	transcription start site region 67298	78 bp downstream