rs52568678 SNP Detail

Summary

• ID
  rs52568678
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:61651052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CCCAAAATTA TTGTTTGTCT TCAAACACGT ATACATGTGT
  TAATATATAT GTGTGTTTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTAT ATATATATAT
  R
  TATATATATA TATATATATA GTATATAATA TCTGTAGCTC TTACATTGCC TATTGAAAAT
  AGTTGAAAAA ATTTAAAAGG ATTAAGCTTA TATTCATAAG T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137815020	ENSMUSSNP5588725	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52568678					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:61651052 () rs orientation: forward

Symbol	Name	Function Class
Lrfn5	leucine rich repeat and fibronectin type III domain containing 5	within coordinates
Tssr113582	transcription start site region 113582	383 bp downstream