rs52572917 SNP Detail

Summary

• ID
  rs52572917
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:64517848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGATGACATC TTCAAGGAAG AAATTATATA TGTGTGTGTG
  TGTGTGTGTG TGTATACATA TGTATGTATA TACATATATG TATATATAGG TGTGTATATA
  Y
  GTATATGCAT ATATATATGT ATATATATAT ATATGTATAT ATATATATAT GTATATATAT
  ATATATATGT ATATATATAT ATATAGAGAG AGAGAGAGAG A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137828135	ENSMUSSNP4991280	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52572917					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:64517848 () rs orientation: forward

Symbol	Name	Function Class
Fscb	fibrous sheath CABYR binding protein	256 bp downstream