rs52575140 SNP Detail

Summary

• ID
  rs52575140
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8856943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGACAAAG AAGGGTTTCT
  AAAACACAGT ACAAAGTGAC AGAAATTAAA CTTGTATGGT ATTGACTTAA GATTAGACTT
  AGTGGGGATA ATGAGATAGC TTATCTGGTT AAAGAGCTTG CTGCTAAGCC TGGCAACTTA
  GGCTCAACCC CTGGGAACCT CTAGGTGTAA GGAGAGCACC AACAAATTGT TCTCTGATAT
  C
  GCACTCACAC TATGGTACAC ACACATACGC ACACACACAC ACATACACAT GTACACACAA
  ACATACACTC ACATATGCAT ATACACACAT ATACATACGT ACATACAAAC ACACACATAT
  ACACACTTAT ACACACATAC ACACATACAC CTCCTACACA CATATAGACA CATTTATATA
  CACATACACA CAGACATATA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss146769109	ENSMUSSNP2684833	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss323246141	CHEV_10_8700997	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52575140					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8856943 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	1658 bp proximal